MEA vs Spatial
Step 1 of 3 — Select Experiment
Experiment:
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MEA
Flip X
Flip Y
Spatial
Flip X
Flip Y
Submit →
Step 2 of 3 — Mask Pipeline
MEA
Spatial
Final Tissue Masks
Choose Alignment Method
Snug-Fit Search
Generalized Procrustes Alignment
Continue →
← Start Over
Slice
hover · click to pin · scroll/drag on overlay
Time
▶ Play
−10s
+10s
0–10 s
Lasso
✕ Clear
Computing…
Draw
Universe
then
Local
on the overlay to compare regions. Local is auto-clipped to Universe.
Universe
—
Local
—
Enriched in Local
Univ
Local
Combined — MEA + Spatial overlay · scroll to zoom · drag to pan
Mask outlines
Spatial
MEA
✏ Lasso
Universe
Local
✕ Clear
MEA — Electrode Activity
0
—
Spatial — Visium Spots
MEA → Spatial Alignment
Electrode
—
Spot
—